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L. Cowen, K. Devkota, X. Hu, J.M. Murphy, and Kaiyi Wu. "Diffusion State Distances: Multitemporal Analysis, Fast Algorithms, and Applications to Biological Networks."

arXiv. 2020





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S. Zhang and J.M. Murphy. "Hyperspectral Image Clustering with Spatially-Regularized Ultrametrics."

arXiv. 2020





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J.M. Murphy. "Patch-Based Diffusion Learning for Hyperspectral Image Clustering."

IGARSS. 2020





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E. Gnang and J.M. Murphy. "Spectral analysis for non-Hermitian matrics."

Linear Algebra and its Applications. 2020





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J.M. Murphy. "Spatially regularized active diffusion learning for high-dimensional images."

Pattern Recognition Letters. 2020





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A. Little, M. Maggioni, and J.M. Murphy. "Path-based spectral clustering: Guarantees, robustness to outliers, and fast algorithms."

Journal of Machine Learning Research. 2020





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K. Kashkooli, S.L. Polk, E.Y. Hahm, J.M. Murphy, B.R. Ethridge, J. Gitlin, R. Ibala, J. Mekonnen, J.C. Pedemonte, H. Sun, M.B. Westover, R. Barbieri, O. Akeju, S. Chamadia. "Improved tracking of sevoflurane anesthetic states with drug-specific machine learning models."

Journal of Neural Engineering. 2020





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K. Devkota, J.M. Murphy and L. Cowen. "GLIDE: Combining Local Methods and Diffusion State Embeddings to Predict Missing Interactions in Biological Networks"

Bioinformatics. 2020





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J.M. Murphy and M. Maggioni. "Spectral-spatial diffusion geometry for hyperspectral image clustering."

IEEE Geoscience and Remote Sensing Letters. 2020





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M. Maggioni and J.M. Murphy. "Learning by Unsupervised Nonlinear Diffusion."

Journal of Machine Learning Research. 2019





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J.M. Murphy and M. Maggioni. "Unsupervised clustering and active learning of hyperspectral images with nonlinear diffusion."

IEEE Transactions on Geoscience and Remote Sensing. 2019





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N. Kapsin and J.M. Murphy. "Spatially regularized multiscale graph clustering for electron microscopy."

SPIE. 2019





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J.M. Murphy and M. Maggioni. "Unsupervised Discriminative Dimension Reduction for Hyperspectral Chemical Plume Segmentation."

IGARSS. 2019





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S.L.Polk, K. Kashkooli, S.B. Nagaraj, S. Chamadia, J.M. Murphy, H. Sun, M.B. Westover, R. Barbieri, and O. Akeju. "Automatic Detection of General Anesthetic-States using ECG-Derived Autonomic Nervous System Features."

EMBC. 2019





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K. Kashkooli, S.L. Polk, S. Chamadia, E. Hahm, B. Ethridge, J. Gitlin, R. Ibala, J. Mekonnen, J. Pedemonte, J.M. Murphy, H. Sun, M.B. Westover, and O. Akeju. "Drug-Specific Models Improve the Performance of an EEG-based Automated Brain-State Prediction System."

EMBC. 2019





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M. Maggioni and J.M. Murphy. "Learning by Active Nonlinear Diffusion."

Foundations of Data Science. 2019





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Y. Liu, B. Tracey, S. Aeron, E. Miller, J. Murphy, T. Sun, N. McDannold. "Artifact Suppression for Passive Cavitation Imaging Using U-Net CNNs with Uncertainty Quantification."

ICISP. 2019





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W. Czaja, J.M. Murphy, and D. Weinberg. "Superresolution of Noisy Remotely Sensed Images Through Directional Representations."

IEEE Geoscience and Remote Sensing Letters. 2018





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W. Czaja, B. Manning, J.M. Murphy, and K. Stubbs. "Discrete Directional Gabor Frames."

Applied and Computational Harmonic Analysis. 2018





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J.M. Murphy and M. Maggioni. "Iterative active learning with diffusion geometry for hyperspectral images."

WHISPERS. 2018





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J.M. Murphy and M. Maggioni. "Diffusion geometric methods for fusion of remotely sensed data."

SPIE. 2018





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E.J. King and J.M. Murphy. "Diffusion geometric methods for fusion of remotely sensed data."

PAMM. 2017





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J.M. Murphy and J. Le Moigne and D.J. Harding. "Automatic image registration of multimodal remotely sensed data with global shearlet features."

IEEE Transactions on Geoscience and Remote Sensing. 2016





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J.M. Murphy and O.N. Leija and J. Le Moigne. "Agile multi-scale decompositions for automatic image registration."

SPIE. 2016





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W. Czaja, L. McLean, B. Manning, and J.M. Murphy. "Fusion of aerial gamma-ray survey and remote sensing data for a deeper understanding of radionuclide fate after radiological incidents: examples from the Fukushima Dai-Ichi response."

Journal of Radioanalytical and Nuclear Chemistry. 2016





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J.M. Murphy and J. Le Moigne. "Shearlet features for registration of remotely sensed multitemporal images."

IGARSS. 2015





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W. Czaja, D. Weinberg and J.M. Murphy. "Superresolution of remotely sensed images with anisotropic features."

SAMPTA. 2015





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E. Bosch, W. Czaja, D. Weinberg and J.M. Murphy. "Anisotropic representations for superresolution of hyperspectral data."

SPIE. 2015





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J.M. Murphy. "Anisotropic harmonic analysis and integration of remotely sensed data."

Ph.D. Thesis. 2014





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W. Czaja, T. Doster, and J.M. Murphy. "Wavelet packet mixing for image fusion and pan-sharpening."

SPIE. 2014